I’ve stumbled across a page which compares Comet Shoemaker-Levy-9’s unexpectedly bright (and millions of km early) reaction to Jupiter with Comet Tempel-1 reacting to Deep Impact’s arrival.
Thankfully, the observations include things like Jupiter’s own reactions to SL9 arriving.
Amongst other things, tiny fragments of the comet severely ramped up Jupiter’s auroral activity — and in abnormal areas of Jupiter. Fragment G of SL9 appears to have made a big personal claim-to-fame by smacking into Jupiter’s plasma-sheath (the edge of Jupiter’s magnetosphere) a few million kilometers before phsyical impact with Jupiter’s surface.
A truer feeling for scientific reaction to comets “misbehaving” so obviously can proabably be gleaned from the Sky & Telescope phraseology:
When [SL9] Fragment A hit the giant planet, it threw up a fireball so unexpectedly bright that it seemed to knock the world's astronomical community off its feet
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